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The Republic Military was a branch of the Grand Army of the Republic during the Clone Wars which specialized in ground assaults, an equivalent to the Republic Navy. The Republic Military contained roughly nine million (~9,000,000) clone trooper units and exactly 999 Legions.
The Republic Military was founded in 22 BBY under the Grand Army of the Republic by the Galactic Senate to address the increasing hostilities against the Trade Federation, specifically shortly after it's occupation of Naboo. Supreme Chancellor Sheev Palpatine would be the sole commander of the military for it's three year life-spawn before being decommissioned and replaced with the Imperial Military not long after Order 66.
The Republic Military encompassed the 999 Clone Legions within it. While Legions were led by a Jedi General(s) and a Clone Commander or Captain, they obeyed orders received from the Republic Military.